CRAN/E | covdepGE

covdepGE

Covariate Dependent Graph Estimation

Installation

About

A covariate-dependent approach to Gaussian graphical modeling as described in Dasgupta et al. (2022). Employs a novel weighted pseudo-likelihood approach to model the conditional dependence structure of data as a continuous function of an extraneous covariate. The main function, covdepGE::covdepGE(), estimates a graphical representation of the conditional dependence structure via a block mean-field variational approximation, while several auxiliary functions (inclusionCurve(), matViz(), and plot.covdepGE()) are included for visualizing the resulting estimates.

github.com/JacobHelwig/covdepGE
Bug report File report

Key Metrics

Version 1.0.1
Published 2022-09-16 767 days ago
Needs compilation? yes
License GPL (≥ 3)
CRAN checks covdepGE results
Language en-US

Downloads

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Maintainer

Maintainer

Jacob Helwig

Authors

Jacob Helwig

cre / aut

Sutanoy Dasgupta

aut

Peng Zhao

aut

Bani Mallick

aut

Debdeep Pati

aut

Material

README
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

covdepGE archive

Imports

doParallel
foreach
ggplot2
glmnet
latex2exp
MASS
parallel
Rcpp
reshape2
stats

Suggests

testthat ≥ 3.0.0
covr
vdiffr

LinkingTo

Rcpp
RcppArmadillo