crosshap
Local Haplotype Clustering and Visualization
A local haplotyping visualization toolbox to capture major patterns of co-inheritance between clusters of linked variants, whilst connecting findings to phenotypic and demographic traits across individuals. 'crosshap' enables users to explore and understand genomic variation across a trait-associated region. For an example of successful local haplotype analysis, see Marsh et al. (2022)
- Version1.4.0
- R version≥ 4.00
- LicenseMIT
- Licensefile LICENSE
- Needs compilation?No
- Last release03/31/2024
Documentation
Team
Jacob Marsh
Brady Johnston
Jakob Petereit
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- Depends1 package
- Imports16 packages
- Suggests6 packages