dendsort
Modular Leaf Ordering Methods for Dendrogram Nodes
An implementation of functions to optimize ordering of nodes in a dendrogram, without affecting the meaning of the dendrogram. A dendrogram can be sorted based on the average distance of subtrees, or based on the smallest distance value. These sorting methods improve readability and interpretability of tree structure, especially for tasks such as comparison of different distance measures or linkage types and identification of tight clusters and outliers. As a result, it also introduces more meaningful reordering for a coupled heatmap visualization. This method is described in "dendsort: modular leaf ordering methods for dendrogram representations in R", F1000Research 2014, 3: 177 doi:10.12688/f1000research.4784.1.
- Version0.3.4
- R versionunknown
- LicenseGPL-2
- LicenseGPL-3
- Needs compilation?No
- dendsort: modular leaf ordering methods for dendrogram representations in R
- Last release04/20/2021
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Team
Evan Biederstedt
Ryo Sakai
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Last 30 days
This package has been downloaded 1,202 times in the last 30 days. Now we’re talking! This work is officially 'heard of in academic circles', just like those wild research papers on synthetic bananas. The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 58 times.
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Last 365 days
This package has been downloaded 13,532 times in the last 365 days. That's enough downloads to make it mildly famous in niche technical communities. A badge of honor! The day with the most downloads was May 08, 2024 with 90 downloads.
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