ecodive
Parallel and Memory-Efficient Ecological Diversity Metrics
Computes alpha and beta diversity metrics using concurrent 'C' threads. Metrics include 'UniFrac', Faith's phylogenetic diversity, Bray-Curtis dissimilarity, Shannon diversity index, and many others. Also parses newick trees into 'phylo' objects and rarefies feature tables.
- Version2.2.0
- R version≥ 3.6.0
- LicenseMIT
- LicenseLICENSE
- Needs compilation?Yes
- Last releaselast Thursday at 12:00 AM
Documentation
Team
Daniel P. Smith
MaintainerShow author detailsAlkek Center for Metagenomics and Microbiome Research
Show author detailsRolesCopyright holder, fnd
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