ecpc
Flexible Co-Data Learning for High-Dimensional Prediction
Fit linear, logistic and Cox survival regression models penalised with adaptive multi-group ridge penalties. The multi-group penalties correspond to groups of covariates defined by (multiple) co-data sources. Group hyperparameters are estimated with an empirical Bayes method of moments, penalised with an extra level of hyper shrinkage. Various types of hyper shrinkage may be used for various co-data. Co-data may be continuous or categorical. The method accommodates inclusion of unpenalised covariates, posterior selection of covariates and multiple data types. The model fit is used to predict for new samples. The name 'ecpc' stands for Empirical Bayes, Co-data learnt, Prediction and Covariate selection. See Van Nee et al. (2020) doi:10.48550/arXiv.2005.04010.
- Version3.1.1
- R versionunknown
- LicenseGPL (≥ 3)
- Needs compilation?No
- Last release02/27/2023
Team
Mirrelijn M. van Nee
Mark A. van de Wiel
Show author detailsRolesAuthorLodewyk F.A. Wessels
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Last 30 days
This package has been downloaded 693 times in the last 30 days. Not bad! The download count is somewhere between 'small-town buzz' and 'moderate academic conference'. The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 6 times.
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Last 365 days
This package has been downloaded 9,641 times in the last 365 days. Impressive! The kind of number that makes colleagues ask, 'How did you do it?' The day with the most downloads was Apr 12, 2025 with 89 downloads.
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Dependencies
- Imports13 packages
- Suggests12 packages
- Reverse Suggests2 packages