epichains
Simulating and Analysing Transmission Chain Statistics Using Branching Process Models
Provides methods to simulate and analyse the size and length of branching processes with an arbitrary offspring distribution. These can be used, for example, to analyse the distribution of chain sizes or length of infectious disease outbreaks, as discussed in Farrington et al. (2003) doi:10.1093/biostatistics/4.2.279.
- Version0.1.1
- R versionunknown
- LicenseMIT
- LicenseLICENSE
- Needs compilation?No
- Languageen-GB
- Last release10/14/2024
Documentation
- VignetteLiterature on branching process applications
- VignetteDesign Principles for {epichains}
- VignetteGetting started with epichains
- VignetteModelling disease control interventions
- VignetteProjecting infectious disease incidence: a COVID-19 example
- VignetteTheoretical background for epichains
- MaterialREADME
- MaterialNEWS
Team
James M. Azam
Joshua W. Lambert
Sebastian Funk
Show author detailsRolesAuthor, Copyright holderZhian N. Kamvar
Show author detailsRolesContributorHugo Gruson
Show author detailsRolesContributor, ReviewerKarim Mané
Show author detailsRolesReviewerPratik Gupte
Show author detailsRolesReviewerFlavio Finger
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- Imports1 package
- Suggests10 packages