fastqcr
Quality Control of Sequencing Data
'FASTQC' is the most widely used tool for evaluating the quality of high throughput sequencing data. It produces, for each sample, an html report and a compressed file containing the raw data. If you have hundreds of samples, you are not going to open up each 'HTML' page. You need some way of looking at these data in aggregate. 'fastqcr' Provides helper functions to easily parse, aggregate and analyze 'FastQC' reports for large numbers of samples. It provides a convenient solution for building a 'Multi-QC' report, as well as, a 'one-sample' report with result interpretations.
- Version0.1.3
- R version≥ 3.1.2
- LicenseGPL-2
- Needs compilation?No
- Last release02/18/2023
Documentation
Team
Alboukadel Kassambara
Insights
Last 30 days
This package has been downloaded 890 times in the last 30 days. More downloads than an obscure whitepaper, but not enough to bring down any servers. A solid effort! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 25 times.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Last 365 days
This package has been downloaded 9,113 times in the last 365 days. That's a lot of interest! Someone might even write a blog post about it. The day with the most downloads was Nov 04, 2024 with 91 downloads.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Data provided by CRAN
Binaries
Dependencies
- Imports12 packages
- Suggests1 package