gbifdb

High Performance Interface to 'GBIF'

CRAN Package

A high performance interface to the Global Biodiversity Information Facility, 'GBIF'. In contrast to 'rgbif', which can access small subsets of 'GBIF' data through web-based queries to a central server, 'gbifdb' provides enhanced performance for R users performing large-scale analyses on servers and cloud computing providers, providing full support for arbitrary 'SQL' or 'dplyr' operations on the complete 'GBIF' data tables (now over 1 billion records, and over a terabyte in size). 'gbifdb' accesses a copy of the 'GBIF' data in 'parquet' format, which is already readily available in commercial computing clouds such as the Amazon Open Data portal and the Microsoft Planetary Computer, or can be accessed directly without downloading, or downloaded to any server with suitable bandwidth and storage space. The high-performance techniques for local and remote access are described in https://duckdb.org/why_duckdb and https://arrow.apache.org/docs/r/articles/fs.html respectively.


Documentation


Team


Insights

Last 30 days

This package has been downloaded 248 times in the last 30 days. Now we're getting somewhere! Enough downloads to populate a lively group chat. The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 10 times.

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0 downloadsMar 16, 2025
0 downloadsMar 17, 2025
0 downloadsMar 18, 2025
0 downloadsMar 19, 2025
17 downloadsMar 20, 2025
11 downloadsMar 21, 2025
10 downloadsMar 22, 2025
6 downloadsMar 23, 2025
12 downloadsMar 24, 2025
3 downloadsMar 25, 2025
5 downloadsMar 26, 2025
7 downloadsMar 27, 2025
5 downloadsMar 28, 2025
3 downloadsMar 29, 2025
4 downloadsMar 30, 2025
6 downloadsMar 31, 2025
7 downloadsApr 1, 2025
4 downloadsApr 2, 2025
8 downloadsApr 3, 2025
7 downloadsApr 4, 2025
6 downloadsApr 5, 2025
7 downloadsApr 6, 2025
13 downloadsApr 7, 2025
5 downloadsApr 8, 2025
4 downloadsApr 9, 2025
2 downloadsApr 10, 2025
10 downloadsApr 11, 2025
20 downloadsApr 12, 2025
3 downloadsApr 13, 2025
17 downloadsApr 14, 2025
9 downloadsApr 15, 2025
15 downloadsApr 16, 2025
12 downloadsApr 17, 2025
10 downloadsApr 18, 2025
0 downloadsApr 19, 2025
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The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 2,618 times in the last 365 days. Now we’re talking! This work is officially 'heard of in academic circles', just like those wild research papers on synthetic bananas. The day with the most downloads was Sep 11, 2024 with 29 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Imports3 packages
  • Suggests7 packages