geneHummus

A Pipeline to Define Gene Families in Legumes and Beyond

CRAN Package

A pipeline with high specificity and sensitivity in extracting proteins from the RefSeq database (National Center for Biotechnology Information). Manual identification of gene families is highly time-consuming and laborious, requiring an iterative process of manual and computational analysis to identify members of a given family. The pipelines implements an automatic approach for the identification of gene families based on the conserved domains that specifically define that family. See Die et al. (2018) doi:10.1101/436659 for more information and examples.


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  • Imports5 packages
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