CRAN/E | glinvci

glinvci

Phylogenetic Comparative Methods with Uncertainty Estimates

Installation

About

A framework for analytically computing the asymptotic confidence intervals and maximum-likelihood estimates of a class of continuous-time Gaussian branching processes defined by Mitov V, Bartoszek K, Asimomitis G, Stadler T (2019) doi:10.1016/j.tpb.2019.11.005. The class of model includes the widely used Ornstein-Uhlenbeck and Brownian motion branching processes. The framework is designed to be flexible enough so that the users can easily specify their own sub-models, or re-parameterizations, and obtain the maximum-likelihood estimates and confidence intervals of their own custom models.

git.sr.ht/~hckiang/glinvci
github.com/hckiang/glinvci

Key Metrics

Version 1.2.2
R ≥ 3.3.0
Published 2023-12-10 227 days ago
Needs compilation? yes
License GPL-3
CRAN checks glinvci results

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Maintainer

Maintainer

Hao Chi Kiang

Authors

Hao Chi Kiang

cre / aut

Material

README
Reference manual
Package source

Vignettes

Getting Started with GLinvCI

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

glinvci archive

Depends

R ≥ 3.3.0

Imports

optimx
lbfgsb3c
BB
ape
numDeriv
plyr
rlang
generics
utils
stats

Suggests

testthat