haplotyper

Tool for Clustering Genotypes in Haplotypes

CRAN Package

Function to identify haplotypes within QTL (Quantitative Trait Loci). One haplotype is a combination of SNP (Single Nucleotide Polymorphisms) within the QTL. This function groups together all individuals of a population with the same haplotype. Each group contains individual with the same allele in each SNP, whether or not missing data. Thus, haplotyper groups individuals, that to be imputed, have a non-zero probability of having the same alleles in the entire sequence of SNP's. Moreover, haplotyper calculates such probability from relative frequencies.

  • Version0.1
  • R version≥ 2.10
  • LicenseGPL-3
  • Needs compilation?No
  • Last release04/06/2016

Documentation


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Insights

Last 30 days

This package has been downloaded 143 times in the last 30 days. More than a random curiosity, but not quite a blockbuster. Still, it's gaining traction! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 5 times.

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0 downloadsMar 2, 2025
10 downloadsMar 3, 2025
10 downloadsMar 4, 2025
5 downloadsMar 5, 2025
3 downloadsMar 6, 2025
4 downloadsMar 7, 2025
1 downloadsMar 8, 2025
2 downloadsMar 9, 2025
1 downloadsMar 10, 2025
6 downloadsMar 11, 2025
3 downloadsMar 12, 2025
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2 downloadsMar 14, 2025
6 downloadsMar 15, 2025
1 downloadsMar 16, 2025
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8 downloadsMar 18, 2025
5 downloadsMar 19, 2025
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4 downloadsMar 22, 2025
7 downloadsMar 23, 2025
6 downloadsMar 24, 2025
3 downloadsMar 25, 2025
4 downloadsMar 26, 2025
4 downloadsMar 27, 2025
2 downloadsMar 28, 2025
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4 downloadsMar 30, 2025
3 downloadsMar 31, 2025
5 downloadsApr 1, 2025
0 downloadsApr 2, 2025
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0 downloadsApr 4, 2025
0 downloadsApr 5, 2025
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The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 1,675 times in the last 365 days. Now we’re talking! This work is officially 'heard of in academic circles', just like those wild research papers on synthetic bananas. The day with the most downloads was Sep 11, 2024 with 22 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


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Dependencies

  • Suggests3 packages