heatmaply
Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2'
Create interactive cluster 'heatmaps' that can be saved as a stand-alone HTML file, embedded in 'R Markdown' documents or in a 'Shiny' app, and available in the 'RStudio' viewer pane. Hover the mouse pointer over a cell to show details or drag a rectangle to zoom. A 'heatmap' is a popular graphical method for visualizing high-dimensional data, in which a table of numbers are encoded as a grid of colored cells. The rows and columns of the matrix are ordered to highlight patterns and are often accompanied by 'dendrograms'. 'Heatmaps' are used in many fields for visualizing observations, correlations, missing values patterns, and more. Interactive 'heatmaps' allow the inspection of specific value by hovering the mouse over a cell, as well as zooming into a region of the 'heatmap' by dragging a rectangle around the relevant area. This work is based on the 'ggplot2' and 'plotly.js' engine. It produces similar 'heatmaps' to 'heatmap.2' with the advantage of speed ('plotly.js' is able to handle larger size matrix), the ability to zoom from the 'dendrogram' panes, and the placing of factor variables in the sides of the 'heatmap'.
- Version1.5.0
- R version≥ 3.0.0
- LicenseGPL-2
- LicenseGPL-3
- Needs compilation?No
- heatmaply citation info
- Last release10/06/2023
Documentation
Team
Tal Galili
MaintainerShow author detailsJaehyun Joo
Show author detailsRolesContributorAlan O'Callaghan
Show author detailsRolesAuthorJonathan Sidi
Show author detailsRolesContributorYoav Benjamini
Show author detailsRolesThesis advisor
Insights
Last 30 days
This package has been downloaded 8,432 times in the last 30 days. Impressive! The kind of number that makes colleagues ask, 'How did you do it?' The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 256 times.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Last 365 days
This package has been downloaded 98,501 times in the last 365 days. This work is reaching a lot of screens. A significant achievement indeed! The day with the most downloads was May 01, 2024 with 746 downloads.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Data provided by CRAN
Binaries
Dependencies
- Depends2 packages
- Imports12 packages
- Suggests6 packages
- Reverse Depends1 package
- Reverse Imports8 packages
- Reverse Suggests3 packages