hlaR
Tools for HLA Data
A streamlined tool for eplet analysis of donor and recipient HLA (human leukocyte antigen) mismatch. Messy, low-resolution HLA typing data is cleaned, and imputed to high-resolution using the NMDP (National Marrow Donor Program) haplotype reference database https://haplostats.org/haplostats. High resolution data is analyzed for overall or single antigen eplet mismatch using a reference table (currently supporting 'HLAMatchMaker' http://www.epitopes.net versions 2 and 3). Data can enter or exit the workflow at different points depending on the user's aims and initial data quality.
- Version1.0.0
- R versionunknown
- LicenseMIT
- LicenseLICENSE
- Needs compilation?No
- Last release01/31/2023
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Team
Joan Zhang
Aileen Johnson
Show author detailsRolesAuthorChristian P Larsen
Show author detailsRolesCopyright holder, Author
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- Imports12 packages
- Suggests2 packages