CRAN/E | integIRTy

integIRTy

Integrating Multiple Modalities of High Throughput Assays Using Item Response Theory

Installation

About

Provides a systematic framework for integrating multiple modalities of assays profiled on the same set of samples. The goal is to identify genes that are altered in cancer either marginally or consistently across different assays. The heterogeneity among different platforms and different samples are automatically adjusted so that the overall alteration magnitude can be accurately inferred. See Tong and Coombes (2012) doi:10.1093/bioinformatics/bts561.

oompa.r-forge.r-project.org/

Key Metrics

Version 1.0.7
R ≥ 2.10
Published 2022-05-03 865 days ago
Needs compilation? no
License Apache License (== 2.0)
CRAN checks integIRTy results

Downloads

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Maintainer

Maintainer

Kevin R. Coombes

Authors

Pan Tong
Kevin R Coombes

Material

Reference manual
Package source

Vignettes

integIRTy Vignette

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

integIRTy archive

Depends

R ≥ 2.10
ltm
foreach
doParallel

Imports

mclust
MASS
abind

Suggests

KernSmooth