jointseg

Joint Segmentation of Multivariate (Copy Number) Signals

CRAN Package

Methods for fast segmentation of multivariate signals into piecewise constant profiles and for generating realistic copy-number profiles. A typical application is the joint segmentation of total DNA copy numbers and allelic ratios obtained from Single Nucleotide Polymorphism (SNP) microarrays in cancer studies. The methods are described in Pierre-Jean, Rigaill and Neuvial (2015) doi:10.1093/bib/bbu026.

Documentation

Team

Insights

Last 30 days

Last 365 days

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN

Binaries

Dependencies

  • Imports2 packages
  • Suggests7 packages
  • Reverse Depends1 package
  • Reverse Imports1 package
  • Reverse Suggests1 package