kmer

Fast K-Mer Counting and Clustering for Biological Sequence Analysis

CRAN Package

Contains tools for rapidly computing distance matrices and clustering large sequence datasets using fast alignment-free k-mer counting and recursive k-means partitioning. See Vinga and Almeida (2003) for a review of k-mer counting methods and applications for biological sequence analysis.


Documentation


Team


Insights

Last 30 days

Last 365 days

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Imports3 packages
  • Suggests5 packages
  • Linking To1 package
  • Reverse Imports4 packages
  • Reverse Suggests1 package