kpcaIG
Variables Interpretability with Kernel PCA
The kernelized version of principal component analysis (KPCA) has proven to be a valid nonlinear alternative for tackling the nonlinearity of biological sample spaces. However, it poses new challenges in terms of the interpretability of the original variables. 'kpcaIG' aims to provide a tool to select the most relevant variables based on the kernel PCA representation of the data as in Briscik et al. (2023) doi:10.1186/s12859-023-05404-y. It also includes functions for 2D and 3D visualization of the original variables (as arrows) into the kernel principal components axes, highlighting the contribution of the most important ones.
- Version1.0
- R versionunknown
- LicenseGPL-3
- Needs compilation?No
- Last release07/21/2024
Team
Mitja Briscik
Sébastien Déjean
Show author detailsRolesAuthorMohamed Heimida
Show author detailsRolesAuthor
Insights
Last 30 days
This package has been downloaded 219 times in the last 30 days. More than a random curiosity, but not quite a blockbuster. Still, it's gaining traction! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 51 times.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Last 365 days
This package has been downloaded 1,473 times in the last 365 days. Consider this 'mid-tier influencer' status—if it were a TikTok, it would get a nod from nieces and nephews. The day with the most downloads was Apr 01, 2025 with 51 downloads.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
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Dependencies
- Imports6 packages