CRAN/E | linelistBayes

linelistBayes

Bayesian Analysis of Epidemic Data Using Line List and Case Count Approaches

Installation

About

Provides tools for performing Bayesian inference on epidemiological data to estimate the time-varying reproductive number and other related metrics. These methods were published in Li and White (2021) doi:10.1371/journal.pcbi.1009210. This package supports analyses based on aggregated case count data and individual line list data, facilitating enhanced surveillance and intervention planning for infectious diseases like COVID-19.

Key Metrics

Version 1.0
R ≥ 2.10
Published 2024-05-03 137 days ago
Needs compilation? yes
License GPL-3
CRAN checks linelistBayes results

Downloads

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Maintainer

Maintainer

Chad Milando

Authors

Chad Milando

aut / cre

Tenglong Li

ctb

Laura White

ctb

Material

README
Reference manual
Package source

Vignettes

linelistBayes: an introduction

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-develnot available

x86_64

r-releasenot available

x86_64

r-oldrelnot available

x86_64

Depends

R ≥ 2.10

Imports

Rcpp ≥ 1.0.11
magrittr
lubridate
coda
dplyr

Suggests

knitr
rmarkdown
testthat ≥ 3.0.0

LinkingTo

Rcpp
RcppArmadillo