mappoly
Genetic Linkage Maps in Autopolyploids
Construction of genetic maps in autopolyploid full-sib populations. Uses pairwise recombination fraction estimation as the first source of information to sequentially position allelic variants in specific homologous chromosomes. For situations where pairwise analysis has limited power, the algorithm relies on the multilocus likelihood obtained through a hidden Markov model (HMM). For more detail, please see Mollinari and Garcia (2019) doi:10.1534/g3.119.400378 and Mollinari et al. (2020) doi:10.1534/g3.119.400620.
- Version0.4.1
- R versionunknown
- LicenseGPL-3
- Needs compilation?Yes
- mappoly citation info
- Last release03/06/2024
Documentation
Team
Marcelo Mollinari
Cristiane Taniguti
Show author detailsRolesAuthorAugusto Garcia
Show author detailsRolesContributorRobert Gentleman
Show author detailsRolesCopyright holderRoss Ihaka
Show author detailsRolesCopyright holderR-core
Show author detailsRolesCopyright holderR Foundation
Show author detailsRolesCopyright holderGabriel Gesteira
Jeekin Lau
Oscar Riera-Lizarazu
Guilhereme Pereira
Zhao-Bang Zeng
Katharine Preedy
Show author detailsRolesContributor, Copyright holder
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- Imports20 packages
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