mashr

Multivariate Adaptive Shrinkage

CRAN Package

Implements the multivariate adaptive shrinkage (mash) method of Urbut et al (2019) <doi:10.1038/s41588-018-0268-8> for estimating and testing large numbers of effects in many conditions (or many outcomes). Mash takes an empirical Bayes approach to testing and effect estimation; it estimates patterns of similarity among conditions, then exploits these patterns to improve accuracy of the effect estimates. The core linear algebra is implemented in C++ for fast model fitting and posterior computation.


Documentation


Team


Insights

Last 30 days

This package has been downloaded 510 times in the last 30 days. More downloads than an obscure whitepaper, but not enough to bring down any servers. A solid effort! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 7 times.

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0 downloadsFeb 9, 2025
0 downloadsFeb 10, 2025
0 downloadsFeb 11, 2025
0 downloadsFeb 12, 2025
0 downloadsFeb 13, 2025
0 downloadsFeb 14, 2025
8 downloadsFeb 15, 2025
13 downloadsFeb 16, 2025
18 downloadsFeb 17, 2025
10 downloadsFeb 18, 2025
19 downloadsFeb 19, 2025
35 downloadsFeb 20, 2025
20 downloadsFeb 21, 2025
16 downloadsFeb 22, 2025
15 downloadsFeb 23, 2025
10 downloadsFeb 24, 2025
10 downloadsFeb 25, 2025
33 downloadsFeb 26, 2025
17 downloadsFeb 27, 2025
5 downloadsFeb 28, 2025
10 downloadsMar 1, 2025
1 downloadsMar 2, 2025
15 downloadsMar 3, 2025
29 downloadsMar 4, 2025
29 downloadsMar 5, 2025
32 downloadsMar 6, 2025
17 downloadsMar 7, 2025
10 downloadsMar 8, 2025
1 downloadsMar 9, 2025
10 downloadsMar 10, 2025
28 downloadsMar 11, 2025
35 downloadsMar 12, 2025
19 downloadsMar 13, 2025
22 downloadsMar 14, 2025
16 downloadsMar 15, 2025
7 downloadsMar 16, 2025
0 downloadsMar 17, 2025
0 downloadsMar 18, 2025
0 downloadsMar 19, 2025
0 downloadsMar 20, 2025
0 downloadsMar 21, 2025
0 downloadsMar 22, 2025
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35

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 5,902 times in the last 365 days. That's a lot of interest! Someone might even write a blog post about it. The day with the most downloads was Sep 11, 2024 with 72 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Depends1 package
  • Imports7 packages
  • Suggests10 packages
  • Linking To3 packages
  • Reverse Imports1 package