CRAN/E | mbmixture

mbmixture

Microbiome Mixture Analysis

Installation

About

Evaluate whether a microbiome sample is a mixture of two samples, by fitting a model for the number of read counts as a function of single nucleotide polymorphism (SNP) allele and the genotypes of two potential source samples. Lobo et al. (2021) doi:10.1093/g3journal/jkab308.

Citation mbmixture citation info
github.com/kbroman/mbmixture
Bug report File report

Key Metrics

Version 0.4
R ≥ 3.1.0
Published 2023-04-27 502 days ago
Needs compilation? no
License MIT
License File
CRAN checks mbmixture results

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Maintainer

Maintainer

Karl W Broman

Authors

Karl W Broman

aut / cre

Material

README
NEWS
Reference manual
Package source

Vignettes

R/mbmixture User Guide

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

mbmixture archive

Depends

R ≥ 3.1.0

Imports

stats
parallel
numDeriv

Suggests

knitr
rmarkdown
testthat
devtools
roxygen2