miLineage

Association Tests for Microbial Lineages on a Taxonomic Tree

CRAN Package

A variety of association tests for microbiome data analysis including Quasi-Conditional Association Tests (QCAT) described in Tang Z.-Z. et al.(2017) doi:10.1093/bioinformatics/btw804 and Zero-Inflated Generalized Dirichlet Multinomial (ZIGDM) tests described in Tang Z.-Z. & Chen G. (2017, submitted).


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  • Depends3 packages