mixKernel
Omics Data Integration Using Kernel Methods
Kernel-based methods are powerful methods for integrating heterogeneous types of data. mixKernel aims at providing methods to combine kernel for unsupervised exploratory analysis. Different solutions are provided to compute a meta-kernel, in a consensus way or in a way that best preserves the original topology of the data. mixKernel also integrates kernel PCA to visualize similarities between samples in a non linear space and from the multiple source point of view [doi:10.1093/bioinformatics/btx682]. A method to select (as well as funtions to display) important variables is also provided [doi:10.1093/nargab/lqac014].
- Version0.9-1
- R versionunknown
- LicenseGPL-2
- LicenseGPL-3
- Needs compilation?No
- mixKernel citation info
- Last release01/27/2024
Documentation
Team
Nathalie Vialaneix
MaintainerShow author detailsJerome Mariette
Show author detailsRolesAuthorCeline Brouard
Show author detailsRolesAuthorRemi Flamary
Show author detailsRolesAuthorJulien Henry
Show author detailsRolesAuthor
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Last 30 days
This package has been downloaded 249 times in the last 30 days. Now we're getting somewhere! Enough downloads to populate a lively group chat. The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 3 times.
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Last 365 days
This package has been downloaded 3,536 times in the last 365 days. Now we’re talking! This work is officially 'heard of in academic circles', just like those wild research papers on synthetic bananas. The day with the most downloads was Jul 24, 2024 with 43 downloads.
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Dependencies
- Depends2 packages
- Imports7 packages
- Suggests2 packages