CRAN/E | motifr

motifr

Motif Analysis in Multi-Level Networks

Installation

About

Tools for motif analysis in multi-level networks. Multi-level networks combine multiple networks in one, e.g. social-ecological networks. Motifs are small configurations of nodes and edges (subgraphs) occurring in networks. 'motifr' can visualize multi-level networks, count multi-level network motifs and compare motif occurrences to baseline models. It also identifies contributions of existing or potential edges to motifs to find critical or missing edges. The package is in many parts an R wrapper for the excellent 'SESMotifAnalyser' 'Python' package written by Tim Seppelt.

marioangst.github.io/motifr/
System requirements Python (>= 3.0.0), numpy, pandas
Bug report File report

Key Metrics

Version 1.0.0
R ≥ 3.5.0
Published 2020-12-10 1402 days ago
Needs compilation? no
License MIT
License File
CRAN checks motifr results
Language en-GB

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Maintainer

Maintainer

Mario Angst

Authors

Mario Angst

aut / cre

Tim Seppelt

aut

Material

README
NEWS
Reference manual
Package source

Vignettes

The motif zoo
Baseline model comparisons

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Depends

R ≥ 3.5.0

Imports

dplyr
ggplot2 ≥ 2.1.0
ggraph
igraph
intergraph
network
purrr
RColorBrewer
reshape2
reticulate
rlang
scales
tibble
tidygraph

Suggests

ergm
knitr
pkgdown
rmarkdown
shiny
testthat ≥ 2.1.0