CRAN/E | mxnorm

mxnorm

Apply Normalization Methods to Multiplexed Images

Installation

About

Implements methods to normalize multiplexed imaging data, including statistical metrics and visualizations to quantify technical variation in this data type. Reference for methods listed here: Harris, C., Wrobel, J., & Vandekar, S. (2022). mxnorm: An R Package to Normalize Multiplexed Imaging Data. Journal of Open Source Software, 7(71), 4180, doi:10.21105/joss.04180.

Key Metrics

Version 1.0.3
R ≥ 3.5.0
Published 2023-05-01 525 days ago
Needs compilation? no
License MIT
License File
CRAN checks mxnorm results

Downloads

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Maintainer

Maintainer

Coleman Harris

Authors

Coleman Harris

aut / cre

Material

README
Reference manual
Package source

Vignettes

mxnorm-vignette1

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

mxnorm archive

Depends

R ≥ 3.5.0

Imports

magrittr
dplyr
rlang
fda
stats
data.table
reticulate
caret
e1071
ggplot2
tidyr
uwot
lme4
stringr
KernSmooth
kSamples
psych
fossil
glue
methods

Suggests

knitr
janitor ≥ 2.1.0
testthat ≥ 3.0.0
rmarkdown
markdown
covr