CRAN/E | netmhc2pan

netmhc2pan

Interface to 'NetMHCIIpan'

Installation

About

The field of immunology benefits from software that can predict which peptide sequences trigger an immune response. 'NetMHCIIpan' is a such a tool: it predicts the binding strength of a short peptide to a Major Histocompatibility Complex class II (MHC-II) molecule. 'NetMHCIIpan' can be used from a web server at or from the command-line, using a local installation. This package allows to call 'NetMHCIIpan' from R.

github.com/richelbilderbeek/netmhc2pan/
System requirements NetMHC2pan (https://services.healthtech.dtu.dk/service.php?NetMHCIIpan-3.2)
Bug report File report

Key Metrics

Version 1.3.1
Published 2020-11-18 1421 days ago
Needs compilation? no
License GPL-3
CRAN checks netmhc2pan results
Language en-US

Downloads

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Maintainer

Maintainer

Richèl J.C. Bilderbeek

Authors

Richèl J.C. Bilderbeek

aut / cre

Byungkuk Min

ctb

Material

Reference manual
Package source

Vignettes

Demo

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Imports

assertive
devtools
dplyr
rappdirs
readr
seqinr
stringr
testit
tibble

Suggests

knitr
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spelling