CRAN/E | noise

noise

Estimation of Intrinsic and Extrinsic Noise from Single-Cell Data

Installation

About

Functions to calculate estimates of intrinsic and extrinsic noise from the two-reporter single-cell experiment, as in Elowitz, M. B., A. J. Levine, E. D. Siggia, and P. S. Swain (2002) Stochastic gene expression in a single cell. Science, 297, 1183-1186. Functions implement multiple estimators developed for unbiasedness or min Mean Squared Error (MSE) in Fu, A. Q. and Pachter, L. (2016). Estimating intrinsic and extrinsic noise from single-cell gene expression measurements. Statistical Applications in Genetics and Molecular Biology, 15(6), 447-471.

Key Metrics

Version 1.0.2
R ≥ 2.10
Published 2024-02-29 221 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks noise results

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Maintainer

Maintainer

Audrey Q. Fu

Authors

Audrey Qiuyan Fu
Lior Pachter

Material

Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

noise archive

Depends

R ≥ 2.10

Imports

preprocessCore