nosoi

A Forward Agent-Based Transmission Chain Simulator

CRAN Package

The aim of 'nosoi' (pronounced no.si) is to provide a flexible agent-based stochastic transmission chain/epidemic simulator (Lequime et al. Methods in Ecology and Evolution 11:1002-1007). It is named after the daimones of plague, sickness and disease that escaped Pandora's jar in the Greek mythology. 'nosoi' is able to take into account the influence of multiple variable on the transmission process (e.g. dual-host systems (such as arboviruses), within-host viral dynamics, transportation, population structure), alone or taken together, to create complex but relatively intuitive epidemiological simulations.


Documentation


Team


Insights

Last 30 days

This package has been downloaded 322 times in the last 30 days. Enough downloads to make a small wave in the niche community. The curiosity is spreading! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 4 times.

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0 downloadsFeb 9, 2025
0 downloadsFeb 10, 2025
0 downloadsFeb 11, 2025
0 downloadsFeb 12, 2025
19 downloadsFeb 13, 2025
19 downloadsFeb 14, 2025
5 downloadsFeb 15, 2025
8 downloadsFeb 16, 2025
13 downloadsFeb 17, 2025
17 downloadsFeb 18, 2025
13 downloadsFeb 19, 2025
32 downloadsFeb 20, 2025
5 downloadsFeb 21, 2025
7 downloadsFeb 22, 2025
13 downloadsFeb 23, 2025
9 downloadsFeb 24, 2025
10 downloadsFeb 25, 2025
11 downloadsFeb 26, 2025
12 downloadsFeb 27, 2025
4 downloadsFeb 28, 2025
12 downloadsMar 1, 2025
5 downloadsMar 2, 2025
4 downloadsMar 3, 2025
14 downloadsMar 4, 2025
18 downloadsMar 5, 2025
6 downloadsMar 6, 2025
4 downloadsMar 7, 2025
10 downloadsMar 8, 2025
3 downloadsMar 9, 2025
6 downloadsMar 10, 2025
12 downloadsMar 11, 2025
9 downloadsMar 12, 2025
18 downloadsMar 13, 2025
4 downloadsMar 14, 2025
0 downloadsMar 15, 2025
3
32

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 4,251 times in the last 365 days. That's enough downloads to impress a room full of undergrads. A commendable achievement indeed. The day with the most downloads was Sep 11, 2024 with 44 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Depends1 package
  • Imports1 package
  • Suggests16 packages