CRAN/E | ontologySimilarity

ontologySimilarity

Calculating Ontological Similarities

Installation

About

Calculate similarity between ontological terms and sets of ontological terms based on term information content and assess statistical significance of similarity in the context of a collection of terms sets - Greene et al. 2017 doi:10.1093/bioinformatics/btw763.

Key Metrics

Version 2.7
R ≥ 3.5.0
Published 2024-03-29 189 days ago
Needs compilation? yes
License GPL-2
License GPL-3
CRAN checks ontologySimilarity results

Downloads

Yesterday 6 -73%
Last 7 days 68 -25%
Last 30 days 335 -7%
Last 90 days 990 -5%
Last 365 days 3.892 +21%

Maintainer

Maintainer

Daniel Greene

Authors

Daniel Greene

Material

Reference manual
Package source

Vignettes

Gene Ontology data objects
Examples
Introduction

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

ontologySimilarity archive

Depends

R ≥ 3.5.0

Imports

Rcpp ≥ 1.0.0
ontologyIndex ≥ 2.0

Suggests

knitr
rmarkdown
paintmap

LinkingTo

Rcpp

Reverse Imports

SimReg