outbreaker2
Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data
Bayesian reconstruction of disease outbreaks using epidemiological and genetic information. Jombart T, Cori A, Didelot X, Cauchemez S, Fraser C and Ferguson N. 2014. doi:10.1371/journal.pcbi.1003457. Campbell, F, Cori A, Ferguson N, Jombart T. 2019. doi:10.1371/journal.pcbi.1006930.
- Version1.1.3
- R version≥ 3.5.0
- LicenseMIT
- LicenseLICENSE
- Needs compilation?Yes
- outbreaker2 citation info
- Last release05/23/2022
Documentation
Team
Finlay Campbell
Thibaut Jombart
Show author detailsRolesAuthorAlexis Robert
Show author detailsRolesContributorGerry Tonkin-Hill
Show author detailsRolesContributorRich Fitzjohn
Show author detailsRolesAuthorKristjan Eldjarn
Show author detailsRolesContributor
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- Imports5 packages
- Suggests8 packages
- Linking To1 package
- Reverse Imports1 package