CRAN/E | pedtools

pedtools

Creating and Working with Pedigrees and Marker Data

Installation

About

A comprehensive collection of tools for creating, manipulating and visualising pedigrees and genetic marker data. Pedigrees can be read from text files or created on the fly with built-in functions. A range of utilities enable modifications like adding or removing individuals, breaking loops, and merging pedigrees. An online tool for creating pedigrees interactively, based on 'pedtools', is available at . 'pedtools' is the hub of the 'pedsuite', a collection of packages for pedigree analysis. A detailed presentation of the 'pedsuite' is given in the book 'Pedigree Analysis in R' (Vigeland, 2021, ISBN:9780128244302).

Citation pedtools citation info
github.com/magnusdv/pedtools
magnusdv.github.io/pedsuite/

Key Metrics

Version 2.6.0
R ≥ 4.1
Published 2024-03-31 190 days ago
Needs compilation? no
License GPL-3
CRAN checks pedtools results
Language en-GB

Downloads

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Maintainer

Maintainer

Magnus Dehli Vigeland

Authors

Magnus Dehli Vigeland

aut / cre

Material

README
NEWS
Reference manual
Package source

Vignettes

Introduction to the pedtools package

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

pedtools archive

Depends

R ≥ 4.1

Imports

kinship2
pedmut

Suggests

igraph
kableExtra
knitr
rmarkdown
testthat

Reverse Depends

dvir
forrel
ibdsim2
paramlink2
pedbuildr
pedFamilias
pedprobr
pedsuite
ribd
segregatr
verbalisr

Reverse Imports

forensIT
KinMixLite
KLINK
mispitools
numberofalleles
simDNAmixtures