pegas
Population and Evolutionary Genetics Analysis System
Functions for reading, writing, plotting, analysing, and manipulating allelic and haplotypic data, including from VCF files, and for the analysis of population nucleotide sequences and micro-satellites including coalescent analyses, linkage disequilibrium, population structure (Fst, Amova) and equilibrium (HWE), haplotype networks, minimum spanning tree and network, and median-joining networks.
- Version1.3
- R versionunknown
- LicenseGPL-2
- LicenseGPL-3
- Needs compilation?Yes
- pegas citation info
- Last release12/13/2023
Documentation
Team
Emmanuel Paradis
MaintainerShow author detailsZhian N. Kamvar
Klaus Schliep
Show author detailsRolesAuthor, Copyright holderThibaut Jombart
Show author detailsRolesAuthor, Copyright holderDavid Winter
Show author detailsRolesAuthor, Copyright holderBrian Knaus
Alastair Potts
Insights
Last 30 days
This package has been downloaded 6,256 times in the last 30 days. A solid achievement! Enough downloads to get noticed at department meetings. The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 142 times.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Last 365 days
This package has been downloaded 69,062 times in the last 365 days. This work is reaching a lot of screens. A significant achievement indeed! The day with the most downloads was Mar 05, 2025 with 494 downloads.
The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.
Data provided by CRAN
Binaries
Dependencies
- Depends1 package
- Suggests2 packages
- Reverse Depends1 package
- Reverse Imports9 packages
- Reverse Suggests4 packages