phangorn

Phylogenetic Reconstruction and Analysis

CRAN Package

Allows for estimation of phylogenetic trees and networks using Maximum Likelihood, Maximum Parsimony, distance methods and Hadamard conjugation (Schliep 2011). Offers methods for tree comparison, model selection and visualization of phylogenetic networks as described in Schliep et al. (2017).


Documentation


Team


Insights

Last 30 days

This package has been downloaded 21,539 times in the last 30 days. The academic equivalent of having a dedicated subreddit. There are fans, and maybe even a few trolls! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 318 times.

Sun
Mon
Tue
Wed
Thu
Fri
Sat
0 downloadsFeb 9, 2025
0 downloadsFeb 10, 2025
0 downloadsFeb 11, 2025
0 downloadsFeb 12, 2025
0 downloadsFeb 13, 2025
0 downloadsFeb 14, 2025
270 downloadsFeb 15, 2025
505 downloadsFeb 16, 2025
903 downloadsFeb 17, 2025
866 downloadsFeb 18, 2025
842 downloadsFeb 19, 2025
1,077 downloadsFeb 20, 2025
773 downloadsFeb 21, 2025
343 downloadsFeb 22, 2025
443 downloadsFeb 23, 2025
918 downloadsFeb 24, 2025
1,122 downloadsFeb 25, 2025
1,031 downloadsFeb 26, 2025
881 downloadsFeb 27, 2025
676 downloadsFeb 28, 2025
296 downloadsMar 1, 2025
412 downloadsMar 2, 2025
900 downloadsMar 3, 2025
843 downloadsMar 4, 2025
920 downloadsMar 5, 2025
1,135 downloadsMar 6, 2025
766 downloadsMar 7, 2025
328 downloadsMar 8, 2025
339 downloadsMar 9, 2025
966 downloadsMar 10, 2025
980 downloadsMar 11, 2025
680 downloadsMar 12, 2025
761 downloadsMar 13, 2025
829 downloadsMar 14, 2025
416 downloadsMar 15, 2025
318 downloadsMar 16, 2025
0 downloadsMar 17, 2025
0 downloadsMar 18, 2025
0 downloadsMar 19, 2025
0 downloadsMar 20, 2025
0 downloadsMar 21, 2025
0 downloadsMar 22, 2025
270
1,135

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 192,716 times in the last 365 days. That's a whole lot of downloads. Somewhere, a librarian is trying to figure out why more bandwidth is needed. The day with the most downloads was Sep 18, 2024 with 1,965 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Depends1 package
  • Imports7 packages
  • Suggests12 packages
  • Linking To1 package
  • Reverse Depends3 packages
  • Reverse Imports39 packages
  • Reverse Suggests14 packages
  • Reverse Enhances1 package