CRAN/E | phylin

phylin

Spatial Interpolation of Genetic Data

Installation

About

The spatial interpolation of genetic distances between samples is based on a modified kriging method that accepts a genetic distance matrix and generates a map of probability of lineage presence. This package also offers tools to generate a map of potential contact zones between groups with user-defined thresholds in the tree to account for old and recent divergence. Additionally, it has functions for IDW interpolation using genetic data and midpoints.

Citation phylin citation info
www.r-project.org
github.com/ptarroso/phylin

Key Metrics

Version 2.0.2
Published 2019-12-12 1761 days ago
Needs compilation? no
License GPL-2
License GPL-3
CRAN checks phylin results

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Maintainer

Maintainer

Pedro Tarroso

Authors

Pedro Tarroso
Guillermo Velo-Anton
Silvia Carvalho

Material

Reference manual
Package source

In Views

MissingData

Vignettes

Phylin: a step-by-step tutorial
Phylin with resistance

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

phylin archive

Suggests

geometry
raster
gdistance