phyloseqGraphTest

Graph-Based Permutation Tests for Microbiome Data

CRAN Package

Provides functions for graph-based multiple-sample testing and visualization of microbiome data, in particular data stored in 'phyloseq' objects. The tests are based on those described in Friedman and Rafsky (1979) http://www.jstor.org/stable/2958919, and the tests are described in more detail in Callahan et al. (2016) doi:10.12688/f1000research.8986.1.

  • Version0.1.1
  • R versionunknown
  • LicenseCC0
  • Needs compilation?No
  • Last release02/05/2024

Documentation


Team


Insights

Last 30 days

This package has been downloaded 612 times in the last 30 days. More downloads than an obscure whitepaper, but not enough to bring down any servers. A solid effort! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 16 times.

Sun
Mon
Tue
Wed
Thu
Fri
Sat
0 downloadsMar 2, 2025
20 downloadsMar 3, 2025
23 downloadsMar 4, 2025
25 downloadsMar 5, 2025
22 downloadsMar 6, 2025
14 downloadsMar 7, 2025
12 downloadsMar 8, 2025
6 downloadsMar 9, 2025
15 downloadsMar 10, 2025
74 downloadsMar 11, 2025
35 downloadsMar 12, 2025
16 downloadsMar 13, 2025
18 downloadsMar 14, 2025
16 downloadsMar 15, 2025
10 downloadsMar 16, 2025
16 downloadsMar 17, 2025
21 downloadsMar 18, 2025
15 downloadsMar 19, 2025
19 downloadsMar 20, 2025
30 downloadsMar 21, 2025
7 downloadsMar 22, 2025
9 downloadsMar 23, 2025
21 downloadsMar 24, 2025
26 downloadsMar 25, 2025
21 downloadsMar 26, 2025
30 downloadsMar 27, 2025
32 downloadsMar 28, 2025
9 downloadsMar 29, 2025
13 downloadsMar 30, 2025
21 downloadsMar 31, 2025
16 downloadsApr 1, 2025
0 downloadsApr 2, 2025
0 downloadsApr 3, 2025
0 downloadsApr 4, 2025
0 downloadsApr 5, 2025
6
74

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 7,749 times in the last 365 days. Impressive! The kind of number that makes colleagues ask, 'How did you do it?' The day with the most downloads was Mar 11, 2025 with 74 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Depends1 package
  • Imports2 packages
  • Suggests2 packages
  • Reverse Suggests2 packages