phyloseqGraphTest

Graph-Based Permutation Tests for Microbiome Data

CRAN Package

Provides functions for graph-based multiple-sample testing and visualization of microbiome data, in particular data stored in 'phyloseq' objects. The tests are based on those described in Friedman and Rafsky (1979) http://www.jstor.org/stable/2958919, and the tests are described in more detail in Callahan et al. (2016) doi:10.12688/f1000research.8986.1.

  • Version0.1.1
  • R versionunknown
  • LicenseCC0
  • Needs compilation?No
  • Last release02/05/2024

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