phylter
Detect and Remove Outliers in Phylogenomics Datasets
Analyzis and filtering of phylogenomics datasets. It takes an input either a collection of gene trees (then transformed to matrices) or directly a collection of gene matrices and performs an iterative process to identify what species in what genes are outliers, and whose elimination significantly improves the concordance between the input matrices. The methods builds upon the Distatis approach (Abdi et al. (2005)
- Version0.9.11
- R version≥ 4.0
- LicenseGPL-2
- LicenseGPL-3
- Needs compilation?Yes
- Last release08/24/2023
Documentation
Team
Aurélie Siberchicot
Damien M. de Vienne
Show author detailsRolesAuthorStéphane Dray
Show author detailsRolesAuthorThéo Tricou
Show author detailsRolesAuthor
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- Depends1 package
- Imports7 packages
- Suggests2 packages
- Linking To3 packages