CRAN/E | protr

protr

Generating Various Numerical Representation Schemes for Protein Sequences

Installation

About

Comprehensive toolkit for generating various numerical features of protein sequences described in Xiao et al. (2015) doi:10.1093/bioinformatics/btv042. For full functionality, the software 'ncbi-blast+' is needed, see for more information.

Citation protr citation info
nanx.me/protr/
github.com/nanxstats/protr
protr.org
System requirements ncbi-blast+ (see <https://blast.ncbi.nlm.nih.gov/doc/blast-help/downloadblastdata.html>)
Bug report File report

Key Metrics

Version 1.7-1
R ≥ 3.0.2
Published 2024-04-20 172 days ago
Needs compilation? no
License BSD_3_clause
License File
CRAN checks protr results

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Maintainer

Maintainer

Nan Xiao

[email protected]

Authors

Nan Xiao

aut / cre

Qing-Song Xu

aut

Dong-Sheng Cao

aut

Sebastian Mueller

ctb

(Alva Genomics)

Material

README
NEWS
Reference manual
Package source

Vignettes

protr: R package for generating various numerical representation schemes of protein sequences

macOS

r-prerel

arm64

r-release

arm64

r-oldrel

arm64

r-prerel

x86_64

r-release

x86_64

Windows

r-prerel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

protr archive

Depends

R ≥ 3.0.2

Suggests

knitr
rmarkdown
Biostrings
GOSemSim
foreach
doParallel
org.Hs.eg.db

Reverse Imports

HPiP
PredCRG
surfaltr