pureseqtmr
Predict Transmembrane Protein Topology
Proteins reside in either the cell plasma or in the cell membrane. A membrane protein goes through the membrane at least once. Given the amino acid sequence of a membrane protein, the tool 'PureseqTM' (https://github.com/PureseqTM/pureseqTM_package), as described in "Efficient And Accurate Prediction Of Transmembrane Topology From Amino acid sequence only.", Wang, Qing, et al (2019), doi:10.1101/627307), can predict the topology of a membrane protein. This package allows one to use 'PureseqTM' from R.
- Version1.4
- R versionunknown
- LicenseGPL-3
- Needs compilation?Yes
- Last release04/06/2023
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Team
Richèl J.C. Bilderbeek
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- Imports11 packages
- Suggests5 packages
- Linking To1 package