pureseqtmr

Predict Transmembrane Protein Topology

CRAN Package

Proteins reside in either the cell plasma or in the cell membrane. A membrane protein goes through the membrane at least once. Given the amino acid sequence of a membrane protein, the tool 'PureseqTM' (, as described in "Efficient And Accurate Prediction Of Transmembrane Topology From Amino acid sequence only.", Wang, Qing, et al (2019), ), can predict the topology of a membrane protein. This package allows one to use 'PureseqTM' from R.

  • Version1.4
  • R version≥ 3.5.0
  • LicenseGPL-3
  • Needs compilation?Yes
  • Last release04/06/2023

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  • Depends1 package
  • Imports11 packages
  • Suggests5 packages
  • Linking To1 package