CRAN/E | qtl2

qtl2

Quantitative Trait Locus Mapping in Experimental Crosses

Installation

About

Provides a set of tools to perform quantitative trait locus (QTL) analysis in experimental crosses. It is a reimplementation of the 'R/qtl' package to better handle high-dimensional data and complex cross designs. Broman et al. (2019) doi:10.1534/genetics.118.301595.

Citation qtl2 citation info
kbroman.org/qtl2/
github.com/rqtl/qtl2
Copyright Code for Brent's method for univariate function optimization was taken from R 3.2.2 (Copyright 1995, 1996 Robert Gentleman and Ross Ihaka, Copyright 2003-2004 The R Foundation, Copyright 1998-2014 The R Core Team).
Bug report File report

Key Metrics

Version 0.36
R ≥ 3.1.0
Published 2024-05-13 149 days ago
Needs compilation? yes
License GPL-3
CRAN checks qtl2 results

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Maintainer

Maintainer

Karl W Broman

[email protected]

Authors

Karl W Broman

aut / cre

R Core Team

ctb

Material

README
NEWS
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

qtl2 archive

Depends

R ≥ 3.1.0

Imports

Rcpp ≥ 1.0.7
yaml ≥ 2.1.13
jsonlite ≥ 0.9.17
data.table ≥ 1.10.4-3
parallel
stats
utils
graphics
grDevices
RSQLite

Suggests

testthat
devtools
roxygen2
vdiffr
qtl

LinkingTo

Rcpp
RcppEigen

Reverse Imports

cape
qtl2convert
qtl2fst
qtl2ggplot
qtl2pattern

Reverse Suggests

mmconvert
qtl2pleio