CRAN/E | rCNV

rCNV

Detect Copy Number Variants from SNPs Data

Installation

About

Functions in this package will import filtered variant call format (VCF) files of SNPs data and generate data sets to detect copy number variants, visualize them and do downstream analyses with copy number variants(e.g. Environmental association analyses).

Citation rCNV citation info
piyalkarum.github.io/rCNV/
cran.r-project.org/package=rCNV
Bug report File report

Key Metrics

Version 1.2.0
R ≥ 3.6.0
Published 2023-08-08 428 days ago
Needs compilation? no
License AGPL (≥ 3)
CRAN checks rCNV results
Language en-US

Downloads

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Maintainer

Maintainer

Piyal Karunarathne

Authors

Piyal Karunarathne

aut / cre

Qiujie Zhou

aut

Klaus Schliep

aut

Pascal Milesi

aut

Material

README
NEWS
Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

rCNV archive

Depends

R ≥ 3.6.0

Imports

data.table
graphics
colorspace
R.utils
qgraph
stringr

Suggests

rmarkdown
knitr
testthat ≥ 3.0.0
covr