ratematrix

Bayesian Estimation of the Evolutionary Rate Matrix

CRAN Package

The Evolutionary Rate Matrix is a variance-covariance matrix which describes both the rates of trait evolution and the evolutionary correlation among multiple traits. This package has functions to estimate these parameters using Bayesian MCMC. It is possible to test if the pattern of evolutionary correlations among traits has changed between predictive regimes painted along the branches of the phylogenetic tree. Regimes can be created a priori or estimated as part of the MCMC under a joint estimation approach. The package has functions to run MCMC chains, plot results, evaluate convergence, and summarize posterior distributions.


Documentation


Team


Insights

Last 30 days

This package has been downloaded 249 times in the last 30 days. Enough downloads to make a small wave in the niche community. The curiosity is spreading! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 16 times.

Sun
Mon
Tue
Wed
Thu
Fri
Sat
0 downloadsFeb 9, 2025
0 downloadsFeb 10, 2025
0 downloadsFeb 11, 2025
0 downloadsFeb 12, 2025
0 downloadsFeb 13, 2025
10 downloadsFeb 14, 2025
8 downloadsFeb 15, 2025
8 downloadsFeb 16, 2025
2 downloadsFeb 17, 2025
13 downloadsFeb 18, 2025
6 downloadsFeb 19, 2025
33 downloadsFeb 20, 2025
3 downloadsFeb 21, 2025
7 downloadsFeb 22, 2025
2 downloadsFeb 23, 2025
4 downloadsFeb 24, 2025
6 downloadsFeb 25, 2025
4 downloadsFeb 26, 2025
17 downloadsFeb 27, 2025
5 downloadsFeb 28, 2025
5 downloadsMar 1, 2025
10 downloadsMar 2, 2025
7 downloadsMar 3, 2025
7 downloadsMar 4, 2025
14 downloadsMar 5, 2025
5 downloadsMar 6, 2025
6 downloadsMar 7, 2025
3 downloadsMar 8, 2025
5 downloadsMar 9, 2025
6 downloadsMar 10, 2025
23 downloadsMar 11, 2025
3 downloadsMar 12, 2025
7 downloadsMar 13, 2025
4 downloadsMar 14, 2025
16 downloadsMar 15, 2025
2
33

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 2,716 times in the last 365 days. Consider this 'mid-tier influencer' status—if it were a TikTok, it would get a nod from nieces and nephews. The day with the most downloads was Feb 11, 2025 with 34 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Imports10 packages
  • Suggests4 packages
  • Linking To2 packages
  • Reverse Imports1 package