scBSP

A Fast Tool for Single-Cell Spatially Variable Genes Identifications on Large-Scale Data

CRAN Package

Identifying spatially variable genes is critical in linking molecular cell functions with tissue phenotypes. This package utilizes a granularity-based dimension-agnostic tool, single-cell big-small patch (scBSP), implementing sparse matrix operation and KD tree methods for distance calculation, for the identification of spatially variable genes on large-scale data. The detailed description of this method is available at Wang, J. and Li, J. et al. 2023 (doi:10.1038/s41467-023-43256-5).


Team


Insights

Last 30 days

This package has been downloaded 452 times in the last 30 days. More than a random curiosity, but not quite a blockbuster. Still, it's gaining traction! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 50 times.

Sun
Mon
Tue
Wed
Thu
Fri
Sat
0 downloadsMar 2, 2025
3 downloadsMar 3, 2025
47 downloadsMar 4, 2025
6 downloadsMar 5, 2025
4 downloadsMar 6, 2025
3 downloadsMar 7, 2025
43 downloadsMar 8, 2025
2 downloadsMar 9, 2025
4 downloadsMar 10, 2025
9 downloadsMar 11, 2025
14 downloadsMar 12, 2025
47 downloadsMar 13, 2025
3 downloadsMar 14, 2025
6 downloadsMar 15, 2025
3 downloadsMar 16, 2025
27 downloadsMar 17, 2025
28 downloadsMar 18, 2025
2 downloadsMar 19, 2025
6 downloadsMar 20, 2025
6 downloadsMar 21, 2025
4 downloadsMar 22, 2025
2 downloadsMar 23, 2025
49 downloadsMar 24, 2025
10 downloadsMar 25, 2025
3 downloadsMar 26, 2025
5 downloadsMar 27, 2025
49 downloadsMar 28, 2025
5 downloadsMar 29, 2025
8 downloadsMar 30, 2025
4 downloadsMar 31, 2025
50 downloadsApr 1, 2025
0 downloadsApr 2, 2025
0 downloadsApr 3, 2025
0 downloadsApr 4, 2025
0 downloadsApr 5, 2025
2
50

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 6,223 times in the last 365 days. A solid achievement! Enough downloads to get noticed at department meetings. The day with the most downloads was Sep 11, 2024 with 60 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Imports4 packages
  • Suggests2 packages