scCAN

Single-Cell Clustering using Autoencoder and Network Fusion

CRAN Package

A single-cell Clustering method using 'Autoencoder' and Network fusion ('scCAN') for segregating the cells from the high-dimensional 'scRNA-Seq' data. The software automatically determines the optimal number of clusters and then partitions the cells in a way such that the results are robust to noise and dropouts. 'scCAN' is fast and it supports Windows, Linux, and Mac OS.


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  • Depends4 packages
  • Imports1 package
  • Suggests1 package