CRAN/E | scRNAtools

scRNAtools

Single Cell RNA Sequencing Data Analysis Tools

Installation

About

We integrated the common analysis methods utilized in single cell RNA sequencing data, which included cluster method, principal components analysis (PCA), the filter of differentially expressed genes, pathway enrichment analysis and correlated analysis methods.

Key Metrics

Version 1.0
R ≥ 2.10
Published 2018-07-05 2282 days ago
Needs compilation? no
License GPL-2
CRAN checks scRNAtools results

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Maintainer

Maintainer

Qian Yang

Authors

Qian Yang

Material

Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Depends

R ≥ 2.10
foreach
base

Imports

ALL
ConsensusClusterPlus
scatterplot3d
ggplot2
Rtsne
limma
edgeR
TPEA
Rmisc
lattice
plyr
ggthemes
reshape2
PerformanceAnalytics
corrplot
Hmisc
igraph
survival

Suggests

grid