scistreer

Maximum-Likelihood Perfect Phylogeny Inference at Scale

CRAN Package

Fast maximum-likelihood phylogeny inference from noisy single-cell data using the 'ScisTree' algorithm by Yufeng Wu (2019) . 'scistreer' provides an 'R' interface and improves speed via 'Rcpp' and 'RcppParallel', making the method applicable to massive single-cell datasets (>10,000 cells).

  • Version1.2.0
  • R version≥ 4.1.0
  • LicenseGPL-3
  • Needs compilation?Yes
  • Last release06/15/2023

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  • Depends1 package
  • Imports14 packages
  • Suggests1 package
  • Linking To3 packages
  • Reverse Imports1 package