scistreer
Maximum-Likelihood Perfect Phylogeny Inference at Scale
Fast maximum-likelihood phylogeny inference from noisy single-cell data using the 'ScisTree' algorithm by Yufeng Wu (2019) doi:10.1093/bioinformatics/btz676. 'scistreer' provides an 'R' interface and improves speed via 'Rcpp' and 'RcppParallel', making the method applicable to massive single-cell datasets (>10,000 cells).
- Version1.2.0
- R versionunknown
- LicenseGPL-3
- Needs compilation?Yes
- Last release06/15/2023
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Team
Teng Gao
Evan Biederstedt
Show author detailsRolesAuthorPeter Kharchenko
Show author detailsRolesAuthorYufeng Wu
Show author detailsRolesAuthor
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- Imports13 packages
- Suggests1 package
- Linking To3 packages
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