scoper
Spectral Clustering-Based Method for Identifying B Cell Clones
Provides a computational framework for identification of B cell clones from Adaptive Immune Receptor Repertoire sequencing (AIRR-Seq) data. Three main functions are included (identicalClones, hierarchicalClones, and spectralClones) that perform clustering among sequences of BCRs/IGs (B cell receptors/immunoglobulins) which share the same V gene, J gene and junction length. Nouri N and Kleinstein SH (2018)
- Version1.3.0
- R version≥ 4.0
- LicenseAGPL-3
- Needs compilation?Yes
- scoper citation info
- Last release10/06/2023
Documentation
Team
Susanna Marquez
Nima Nouri
Show author detailsRolesAuthorEdel Aron
Show author detailsRolesContributorGisela Gabernet
Show author detailsRolesContributorJason Vander Heiden
Show author detailsRolesAuthorSteven Kleinstein
Show author detailsRolesAuthor, Copyright holder
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- Depends2 packages
- Imports13 packages
- Suggests3 packages
- Linking To1 package