scoper

Provides a computational framework for identification of B cell clones from Adaptive Immune Receptor Repertoire sequencing (AIRR-Seq) data. Three main functions are included (identicalClones, hierarchicalClones, and spectralClones) that perform clustering among sequences of BCRs/IGs (B cell receptors/immunoglobulins) which share the same V gene, J gene and junction length. Nouri N and Kleinstein SH (2018) doi:10.1093/bioinformatics/bty235. Nouri N and Kleinstein SH (2019) doi:10.1101/788620. Gupta NT, et al. (2017) doi:10.4049/jimmunol.1601850.

Last 30 days

This package has been downloaded 448 times in the last 30 days. Now we're getting somewhere! Enough downloads to populate a lively group chat. The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 17 times.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 5,280 times in the last 365 days. Impressive! The kind of number that makes colleagues ask, 'How did you do it?' The day with the most downloads was Sep 11, 2024 with 47 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.