scrm
Simulating the Evolution of Biological Sequences
A coalescent simulator that allows the rapid simulation of biological sequences under neutral models of evolution, see Staab et al. (2015) doi:10.1093/bioinformatics/btu861. Different to other coalescent based simulations, it has an optional approximation parameter that allows for high accuracy while maintaining a linear run time cost for long sequences. It is optimized for simulating massive data sets as produced by Next-Generation Sequencing technologies for up to several thousand sequences.
- Version1.7.5
- R versionunknown
- LicenseGPL (≥ 3)
- Needs compilation?Yes
- scrm citation info
- Last release01/08/2024
Documentation
Team
Dirk Metzler
Paul Staab
Show author detailsRolesAuthor, Copyright holderZhu Sha
Show author detailsRolesAuthor, Copyright holderGerton Lunter
Show author detailsRolesAuthor, Copyright holder, Thesis advisor
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