segregatr

Segregation Analysis for Variant Interpretation

CRAN Package

An implementation of the full-likelihood Bayes factor (FLB) for evaluating segregation evidence in clinical medical genetics. The method was introduced by Thompson et al. (2003) doi:10.1086/378100. This implementation supports custom penetrance values and liability classes, and allows visualisations and robustness analysis as presented in Ratajska et al. (2023) doi:10.1002/mgg3.2107. See also the online app 'shinyseg', https://chrcarrizosa.shinyapps.io/shinyseg, which offers interactive segregation analysis with many additional features (Carrizosa et al. (2024) doi:10.1093/bioinformatics/btae201).


Documentation


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Insights

Last 30 days

This package has been downloaded 190 times in the last 30 days. Enough downloads to make a small wave in the niche community. The curiosity is spreading! The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 5 times.

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0 downloadsMar 2, 2025
0 downloadsMar 3, 2025
0 downloadsMar 4, 2025
0 downloadsMar 5, 2025
8 downloadsMar 6, 2025
6 downloadsMar 7, 2025
0 downloadsMar 8, 2025
1 downloadsMar 9, 2025
7 downloadsMar 10, 2025
17 downloadsMar 11, 2025
6 downloadsMar 12, 2025
3 downloadsMar 13, 2025
4 downloadsMar 14, 2025
7 downloadsMar 15, 2025
4 downloadsMar 16, 2025
0 downloadsMar 17, 2025
11 downloadsMar 18, 2025
5 downloadsMar 19, 2025
9 downloadsMar 20, 2025
7 downloadsMar 21, 2025
5 downloadsMar 22, 2025
7 downloadsMar 23, 2025
21 downloadsMar 24, 2025
5 downloadsMar 25, 2025
8 downloadsMar 26, 2025
6 downloadsMar 27, 2025
10 downloadsMar 28, 2025
6 downloadsMar 29, 2025
2 downloadsMar 30, 2025
4 downloadsMar 31, 2025
8 downloadsApr 1, 2025
6 downloadsApr 2, 2025
2 downloadsApr 3, 2025
5 downloadsApr 4, 2025
0 downloadsApr 5, 2025
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The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 2,705 times in the last 365 days. That's enough downloads to impress a room full of undergrads. A commendable achievement indeed. The day with the most downloads was Jul 21, 2024 with 145 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Depends1 package
  • Imports1 package
  • Suggests1 package
  • Reverse Imports1 package