seq2R

Simple Method to Detect Compositional Changes in Genomic Sequences

CRAN Package

This software is useful for loading '.fasta' or '.gbk' files, and for retrieving sequences from 'GenBank' dataset https://www.ncbi.nlm.nih.gov/genbank/. This package allows to detect differences or asymmetries based on nucleotide composition by using local linear kernel smoothers. Also, it is possible to draw inference about critical points (i. e. maximum or minimum points) related with the derivative curves. Additionally, bootstrap methods have been used for estimating confidence intervals and speed computational techniques (binning techniques) have been implemented in 'seq2R'.


Team


Insights

Last 30 days

This package has been downloaded 173 times in the last 30 days. Now we're getting somewhere! Enough downloads to populate a lively group chat. The following heatmap shows the distribution of downloads per day. Yesterday, it was downloaded 11 times.

Sun
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Sat
0 downloadsMar 9, 2025
0 downloadsMar 10, 2025
0 downloadsMar 11, 2025
0 downloadsMar 12, 2025
7 downloadsMar 13, 2025
4 downloadsMar 14, 2025
10 downloadsMar 15, 2025
4 downloadsMar 16, 2025
2 downloadsMar 17, 2025
14 downloadsMar 18, 2025
5 downloadsMar 19, 2025
9 downloadsMar 20, 2025
9 downloadsMar 21, 2025
7 downloadsMar 22, 2025
3 downloadsMar 23, 2025
3 downloadsMar 24, 2025
3 downloadsMar 25, 2025
9 downloadsMar 26, 2025
6 downloadsMar 27, 2025
14 downloadsMar 28, 2025
3 downloadsMar 29, 2025
4 downloadsMar 30, 2025
4 downloadsMar 31, 2025
7 downloadsApr 1, 2025
3 downloadsApr 2, 2025
1 downloadsApr 3, 2025
6 downloadsApr 4, 2025
6 downloadsApr 5, 2025
6 downloadsApr 6, 2025
4 downloadsApr 7, 2025
4 downloadsApr 8, 2025
2 downloadsApr 9, 2025
3 downloadsApr 10, 2025
11 downloadsApr 11, 2025
0 downloadsApr 12, 2025
1
14

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Last 365 days

This package has been downloaded 1,447 times in the last 365 days. That's enough downloads to impress a room full of undergrads. A commendable achievement indeed. The day with the most downloads was Oct 02, 2024 with 41 downloads.

The following line graph shows the downloads per day. You can hover over the graph to see the exact number of downloads per day.

Data provided by CRAN


Binaries


Dependencies

  • Imports1 package