seqminer
Efficiently Read Sequence Data (VCF Format, BCF Format, METAL Format and BGEN Format) into R
Integrate sequencing data (Variant call format, e.g. VCF or BCF) or meta-analysis results in R. This package can help you (1) read VCF/BCF/BGEN files by chromosomal ranges (e.g. 1:100-200); (2) read RareMETAL summary statistics files; (3) read tables from a tabix-indexed files; (4) annotate VCF/BCF files; (5) create customized workflow based on Makefile.
- Version9.7
- R versionunknown
- LicenseGPL-2
- LicenseGPL-3
- Licensefile LICENSE
- Needs compilation?Yes
- seqminer citation info
- Last release10/02/2024
Documentation
Team
Xiaowei Zhan
Dajiang Liu
Show author detailsRolesAuthorAttractive Chaos
Show author detailsRolesCopyright holderBroad Institute / Massachusetts Institute of Technology
Show author detailsRolesCopyright holderGenome Research Ltd
Show author detailsRolesCopyright holderFacebook, Inc
Show author detailsRolesCopyright holderD. Richard Hipp
Show author detailsRolesCopyright holder
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